Nelson Perdigão
Former Collaborator
This author has not yet filled in any details.
[1] Nelson Perdigão, Agostinho Rosa, "Dark Proteome Database: Studies on Dark Proteins", MDPI High-Throughput 8, no. 2: 8., 2019
[2] Nelson Perdigão, Agostinho Rosa, S. O Donoghue, "The Dark Proteome Database", BioData Mining, pp. 10-24. Springer Nature. July, 2017
[3] Nelson Perdigão, J. Heinrich, C. Stolte, K. Sabir, M. Buckley, B. Tabor, B. Signal, B. S. Gloss, C. J. Hammang, B. Rost, A. Schafferhans, S. O Donoghue, "Unexpected features of the dark proteome", PNAS - Proceedings of the National Academy of Sciences of the United States of America. doi: 10.1073/pnas.1508380112, 2015
[4] T. Soldatos, Nelson Perdigão, N. Brown, K. Sabir, S. ODonoghue, "How to learn about gene function: text-mining or ontologies?", Methods, Elsevier, Vol. 74, March 2015, pp. 315, doi:10.1016/j.ymeth.2014.07.004, Epub 2014 Aug 1, 2015
[5] Sean O Donoghue, K. Sabir, M. Kalemanov, C. Stolte, B. Wellmann, V. Ho, M. Roos, Nelson Perdigão, F. Buske, J. Heinrich, B. Rost, A. Schafferhans, "Aquaria: simplifying discovery and insight from protein structures", Nature Methods, Vol. 12, pp. 98-99, Nature, doi:10.1038/nmeth.3258, 2015
[1] J. Tavares, "Sobre a geracao de malhas tridimensionais para fins computacionais a partir de imagens medicas", Proc. of Congress of Methods in Engineering, ISBN 84-95999-74-9, pp.217, SEMNI, Granada, Spain, 2005
[2] J. Tavares, "Geracao de modelos de malhas de elementos finitos a partir de imagens medicas 2D", Proc. of Encontro 1 Biomecanica, ISBN 972-789-151-9, pp.81-85, Sociedade Portuguesa de Biomecanica, Abrantes, Portugal, 2005
[3] Nelson Perdigão, Agostinho Rosa, "Multiple Sequence Alignment by Hybrid Evolutionary Algorithms Applied to BALiBASE", Proc. of ICCB2005 - II International Conference on Computational Bioengineering, Vol. 2, pp. 849-860, ISBN 972-8469-37-3, IST Press, Lisbon, Portugal, 2005
[1] Nelson Perdigão, J. Heinrich, C. Stolte, K. Sabir, M. Buckley, B. Tabor, B. Signal, B. S. Gloss, C. J. Hammang, B. Rost, A. Schafferhans, S. O Donoghue, "Unexpected Features of the ‘Dark’ Proteome of structural biology", Proc. of 3Dsig 2016 - Structural Bioinformatics and Computational Biophysics, Orlando, Florida, USA, pp. 54-55, 2016
[2] Nelson Perdigão, T. Soldatos, K. Sabir, S. O Donoghue, "Visual Analytics of Gene Sets Comparison", Proc. of BDVA 2015 - IEEE International Symposium on Big Data Visual Analytics, Hobart, Tasmania, Australia, 2015
[3] S. O Donoghue, K. Sabir, M. Kalemanov, C. Stolte, B. Wellmann, V. Ho, M. Roos, Nelson Perdigão, F. Buske, J. Heinrich, B. Rost, A. Schafferhans, "Aquaria: simplifying discovery and insight from protein structures", Proc. of 3Dsig 2015 - Structural Bioinformatics and Computational Biophysics, Dublin, Ireland, pp. 76, 2015
[4] S. O Donoghue, K. Sabir, C. Stolte, Nelson Perdigão, V. Ho, V. P. Satagopam, M. Kalemanov, M. Roos, D. Ma, B. Rost, A. Schafferhans, "From SRS 3D to Aquaria, making protein structures discoverable", Proc. of 3Dsig 2013 - Structural Bioinformatics and Computational Biophysics, Berlin, Germany, pp. 97, 2013
[5] Nelson Perdigão, "Java Hidden Markov Model applied to Multiple Sequence Alignment of Proteins", Proc. of ISIB08 5th International Symposium on Integrative Bioinformatics, Leucorea, Lutherstadt Wittenberg, Germany, 2008
[6] Daria Migotina, "Evolutionary Algorithm for Phylogenetic Tree Construction", Proc. of MCCMB2007 - 3rd Moscow Conference on Computational Molecular Biology, pp. 248-249, Moscow State University, Russia, 2007
[7] Daria Migotina, Agostinho Rosa, "Hybrid Evolutionary Algorithms for Multiple Sequence Alignment", Proc. of MCCMB2005 - 2nd Moscow Conference on Computational Molecular Biology, pp. 291-293, Moscow State University, Russia, 2005
[8] S. Domingues, "Surgical correction of scoliosis by the Resina-Alves method: numerical simulation of a clinical case", Proc. of the International Congress on Computacional Bioengineering in Zaragoza Spain, Vol. 2, pp. 471-476, M.Doblare, M. Cerrolaza, H. Rodrigues (Eds.), 2003
[1] Nelson Perdigão, "Illuminating the Dark Proteome", Ph.D. Thesis, Instituto Superior Técnico, Universidade de Lisboa, January, 2017
[1] Nelson Perdigão, "Hybrid Evolutionary Algorithm for Multiple Sequence Alignment", Master Thesis, Instituto Superior Tecnico, Lisbon, Portugal, 2005
[1] Nelson Perdigão, "Alinhamento de Proteinas utilizando Algoritmos Geneticos", Former Report of Project PRODEP III / Take 3 / Action 3.2, 2001
In the same group
Afonso David
Monica Afonso
Raquel Agostinho
AhmadAli
Cristiana Alves
Gina Caetano
Diogo Cardoso
Catarina Carvalho
Diego Castillo-Barnes
Catarina Domingos
Julia Erb
Inês Esteves
Tiago Fernandes
Patrícia Figueiredo
Sérgio Figueiredo
Ana Fouto
Andreia Gaspar
Marc Golub
Irene Guadilla Gómez
Ana Matoso
Neil Mehta
Sara Monteiro
Stephanie Monteiro
Rita Gouveia Nunes
Rita Nunes
Catarina Passarinho
Sérgio Daniel Pequito
Agostinho Rosa
Amparo Ruiz-Tagle
João Sanches
Katarina Vagaja
Madalena Valente
Diogo Vieira
Athanasios Vourvopoulos